Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944396.1_cds_XP_016487224.1_77984
CDS Infomation

[gene=LOC107807382] [db_xref=GeneID:107807382] [protein=protein NRT1/ PTR FAMILY 5.6-like] [protein_id=XP_016487224.1] [location=join(2168..2315,4775..4992,5301..5842,6093..6966)] [gbkey=CDS]
Sequence

ATGGAAAAGAAAAATGTTGAGATAAAGATGGGAGAATCAGTAGAAATTGATGAGCAAAAA
TGGGTTTATGACTCTTCAGTTGATTACAAAGGAAGAGTTCCTCTCAGAGCTTCAACTGGT
GGCTGGAAAGCCTCTTTCTTGATTATTGCAATTGAATTCAGTGAAAGGCTGAGTTACTTT
GGAATAGCCACAAGTTTGATTATATACCTAACTAAGGTTATTCATCAAGACCTAAAAACA
GCAGCAAAAAGTGTGAATTACTGGACAGGTGTCACCACTTTGATGCCATTACTAGGAGGG
TTTGTTGCTGATGCATACTTGGGCAGATTTTACACAGTTCTTGCCTCGACCACTGTCTAT
CTCATGGGCTTGCTTCTGTTGACAATGTCTAGTGTGGTACCAAGCTTGAAACCTTGTGGA
AGTGACATCTGTCAAGAACCTAGAAAAATCCATGTAGTGATCTTTTTCTTTGCTATCTAC
TTAATCTCAATTGGAACAGGAGGGCACAAGCCTTCTTTGGAAAGCTTTGGAGCTGATCAA
TTTGATGATGATTATCCTAAAGAAAGAAGAAAGAAAATGTCTTTCTTCAATTGGTGGAGT
TTTGGACTTTGCTCTGGTGTTTTACTTGGTGTCACACTTATTGTTTATGTACAAGATCAT
GTTAGTTGGGGTATAGCAGATTTGATCCTTACATTAGTTATGGCTTCTAGTCTAGTCATC
TTCTGTGTAGGCAGGCCATTCTATCGTTATCGAAAAGTCACTGAAAGTCCCTTAACTACA
ATGCTACAAGTTATTGTTGCTGCAACTAGAAAAAGAAATCTTCCACATCCTTCTAATCCT
GCTTATTTACATGAAACTCAAAAGTCAGAAGCTAATCGAAGGAGGCTATGTCATACCAAA
AGCCTCAAGTTTCTTGACAAAGCTGCAGTCTTTGATGAGACACAAGATACAATAGTGCAA
AAGCAGAATCCATGGAAACTTTCAACTGTAACCAAAGTGGAGGAACTGAAACTACTTATC
AACATGACACCAATTTGGCTAACCACTTTACCATTTGGTATTTGTATAGCACAAGCTTCA
ACATTTTTCATCAAACAAGGCGTGACACTTAACCGAAAGATCACTCACAATTTTGATATT
CCACCAGCTTCAATGTATGGCATTGGAGCTATTGGCATGATAGTAACTGTCACTATCTAC
GACAAAATCCTCGTACCTATCTTAAGAAAGGCAACAAGAAATGAGAGAGGCATCAGTATT
CTTCAAAGAATCGGTATTGGAATGATGTTCTCGATTATAACTATGATCATTGCAGCTTTG
GTTGAACGAAAGAGACTAAGAATTGTTGAGAAAAATCTACTTGAGGGTTCAATTTCAATG
AGTGTGTTTTGGTTAGCACCTCAGTTTTTTCTCGTTGGTATAGGAGATGGATTCGCGCTA
GTGGGATTGCAAGAGTACTTCTATGATCAAGTACCTGATACAATGAGAAGTTTAGGCATT
GCATTTTACCTTAGTGTAGTTGGTGCAGCAAATTTCCTAAGCAGCATGTTGATCACAATT
GTGGATCATATCACAGAAAAAAGTGGTAAGAGTTGGTTTGGAAAGGATCTGAATAGCAGC
AGACTGGACTACTTCTACTTGTTGTTAGCTACTATAACAGCAGCGAGCTTGTGCATCTAT
GTCTTTGTTGCAAGGAGCTATTCCTACAAGAATGTACAAAGCAAGAGAACTGCGGATGTG
GCTAATTGCCAAGATGGGGATGATCGCGAAGCAATGGCTTAG

Peptide Sequence

PEP ID

XP_016487224.1
PEP Infomation

PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Nicotiana tabacum]
Sequence

MEKKNVEIKMGESVEIDEQKWVYDSSVDYKGRVPLRASTGGWKASFLIIAIEFSERLSYF
GIATSLIIYLTKVIHQDLKTAAKSVNYWTGVTTLMPLLGGFVADAYLGRFYTVLASTTVY
LMGLLLLTMSSVVPSLKPCGSDICQEPRKIHVVIFFFAIYLISIGTGGHKPSLESFGADQ
FDDDYPKERRKKMSFFNWWSFGLCSGVLLGVTLIVYVQDHVSWGIADLILTLVMASSLVI
FCVGRPFYRYRKVTESPLTTMLQVIVAATRKRNLPHPSNPAYLHETQKSEANRRRLCHTK
SLKFLDKAAVFDETQDTIVQKQNPWKLSTVTKVEELKLLINMTPIWLTTLPFGICIAQAS
TFFIKQGVTLNRKITHNFDIPPASMYGIGAIGMIVTVTIYDKILVPILRKATRNERGISI
LQRIGIGMMFSIITMIIAALVERKRLRIVEKNLLEGSISMSVFWLAPQFFLVGIGDGFAL
VGLQEYFYDQVPDTMRSLGIAFYLSVVGAANFLSSMLITIVDHITEKSGKSWFGKDLNSS
RLDYFYLLLATITAASLCIYVFVARSYSYKNVQSKRTADVANCQDGDDREAMA

Transcript Sequence

Gene sequence data has not been registered.